- a -
- A
: plane
, stretch
, torsion
- a
: molindex
, types
, autocorr
, ensindex
, linetype
, linedef
- A
: ensindex
- a
: position_set
, angle_index
- A
: bend
, ensemble
- a
: torsion_index
, residue
, assn_brief
, molecule
, assembly
- AB
: chirality_description
- ac
: rtype
- ai
: residue_tree_index
, moiety_selection
- ALMPER
: amber_prmtop
- altname
: residue
- AMASS
: amber_prmtop
- an
: moiety_selection
- aN
: moiety_selection
- ANALYZE_HOW
: TI_INTEGRATION_INFO
- ang
: torsion_index
, angle_index
- ANG
: assembly
- ANT
: atype
, parameter_set
- AO
: sander_pmemd_command_line
- ASOL
: amber_prmtop
- aT
: assembly
, residue
, molecule
- AT
: parameter_set
- ATOM_LIST
: EE_TI_CHANGE_INFO
- ATPOL
: amber_prmtop
- ATPOL1
: amber_prmtop
- AUTOCORR_DATA
: AMBER_MD_DATA_REQUEST